PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PEQU_16048
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
Family CAMTA
Protein Properties Length: 1055aa    MW: 120344 Da    PI: 6.2574
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PEQU_16048genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1179.93.2e-56111273118
        CG-1   3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100
                 +e ++rwl++ ei++iL n++k++++ e++++p+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+hekLK g+++vl+cyYah+e++++fqrr+yw
  PEQU_16048  11 EEaQHRWLRPLEICEILRNYHKFHIAPEPPNKPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKAGSIDVLHCYYAHGEDDENFQRRSYW 109
                 4559*********************************************************************************************** PP

        CG-1 101 lLeeelekivlvhylevk 118
                 +Leeel +ivlvhy evk
  PEQU_16048 110 MLEEELMHIVLVHYHEVK 127
                 **************9985 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143782.1376132IPR005559CG-1 DNA-binding domain
SMARTSM010763.2E-789127IPR005559CG-1 DNA-binding domain
PfamPF038594.8E-4912125IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.101.7E-5492579IPR013783Immunoglobulin-like fold
CDDcd001020.00415492579No hitNo description
SuperFamilySSF812964.2E-16493578IPR014756Immunoglobulin E-set
PfamPF018332.4E-7493578IPR002909IPT domain
SuperFamilySSF484031.12E-18675788IPR020683Ankyrin repeat-containing domain
Gene3DG3DSA:1.25.40.209.6E-18676789IPR020683Ankyrin repeat-containing domain
CDDcd002043.19E-15688786No hitNo description
PROSITE profilePS5029717.316689788IPR020683Ankyrin repeat-containing domain
SMARTSM002483600694723IPR002110Ankyrin repeat
PROSITE profilePS500888.603694726IPR002110Ankyrin repeat
PfamPF127965.8E-7699789IPR020683Ankyrin repeat-containing domain
SMARTSM002480.027727756IPR002110Ankyrin repeat
SMARTSM00248760766795IPR002110Ankyrin repeat
SMARTSM000150.043900922IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525402.04E-8901951IPR027417P-loop containing nucleoside triphosphate hydrolase
PfamPF006125.5E-4902921IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.736902930IPR000048IQ motif, EF-hand binding site
SMARTSM000150.011923945IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.871924948IPR000048IQ motif, EF-hand binding site
PfamPF006122.5E-4928945IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009409Biological Processresponse to cold
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071275Biological Processcellular response to aluminum ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 1055 aa     Download sequence    Send to blast
ISSIDLEQIL EEAQHRWLRP LEICEILRNY HKFHIAPEPP NKPPSGSLFL FDRKVLRYFR  60
KDGHNWRKKK DGKTVKEAHE KLKAGSIDVL HCYYAHGEDD ENFQRRSYWM LEEELMHIVL  120
VHYHEVKGNK TKFLQPREDG TISRITHVDS PARSNSSVNQ SQSPSLAANL ESPNITHLSE  180
YEDDSADIFQ SSSRYNSFLT MQQYGPRMNV KLANSCDIAP EKDHPCGYQR LQAEIPTFNS  240
FTVAQVGMHS LANESDGGLT FTGTKTMNDM ASWHEIFERC SMELESSNFD MIVASTCANT  300
MEEFPRQDSV ENILNSGLLD ANEDGAAVLS KPIWQVRHNF MHFMMKILLR WHTFSFSSQK  360
STHYVFIVPT KTRNYFLSLH DVNLQFYDDE VGSLIPSITE AENIQKSDTN HMNQLSNLSS  420
IDNQDLKKYD SFSRWASNEL GEVDDSLITL NSGLCWSTLE NDSVVAEPSV HNEEHFDTYL  480
MGPSISHDQL FSIIDFFPNW TYTELETKVL VKGKFLMNKE DVQKYSWSCM FGNIEVPAYI  540
LADGNLCCYT PSHKPGKIPF YVTRSNRFAC SEIREFEYKL NNMQKFENTD SDSSNTNDID  600
LLFRFEKLLV LENSDHTSPD SSHERPHSNC TICSMMMEVD VELLNLFKHA PDEDSPHIAA  660
ENWLLEEPLK EKLHVWLLHK VGEDVKGPNV LDNEGQGVLH LAAALGYDWA IKPIIAAGVG  720
INFRDVHGWT ALHWAAFFGR ERTVVTLIAL DASPGALTDP TPEFPSGRTP ADLASQNGYK  780
GIAGFLAESS LLKHLRELTL KDSKGCDLTE SSGLLDYHHS TDMGSSHNAF GGTQTSLKTS  840
LSAVRNATEA AARIYQVFRV QSFHRKKIMD YGDENCRISD EDAIPLISVK NNKSGQHGMP  900
VHAAAIKIQN KFRGWKGRKE FLTIRQQIVK IQAHVRGHQV RKHYRKILWS VGIVEKVILR  960
WRRKGSGLRG FRSDEPLEAR ISENQDMKED DYDFLQEGRK QTEARLEKAL ARVKSMVQYP  1020
EAIDQYRRLL NAVEELQESD VSSTFSLFTH IANNS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00043PBMTransfer from AT5G64220Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008795548.10.0PREDICTED: calmodulin-binding transcription activator 3-like isoform X2
TrEMBLM0T5T80.0M0T5T8_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P10390_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP60838140
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64220.20.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains